dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00397
Location and strand information: 378041 - 379312 (+)
Family: 2.A.1.14.33
Protein type: TC
Protein description: Hexuronate transporter

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00398
Location and strand information: 379604 - 379777 (-)
Family: null
Protein type: null
Protein description: Stage II sporulation protein SB

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00399
Location and strand information: 379777 - 380523 (-)
Family: 9.A.10.1.1
Protein type: TC
Protein description: Stage II sporulation protein SA

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00400
Location and strand information: 380633 - 381631 (-)
Family: 2.A.20.1.7
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00401
Location and strand information: 381644 - 382261 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00402
Location and strand information: 382594 - 384351 (+)
Family: null
Protein type: null
Protein description: Glutathione hydrolase proenzyme

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00403
Location and strand information: 384486 - 385130 (+)
Family: 9.B.28.1.5
Protein type: TC
Protein description: putative protein YesV

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00404
Location and strand information: 385144 - 386880 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00405
Location and strand information: 386880 - 388049 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00406
Location and strand information: 388195 - 389490 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00407
Location and strand information: 389525 - 390442 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00408
Location and strand information: 390446 - 391339 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00409
Location and strand information: 391358 - 392392 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YesR
Protein isoelectric point: 5.1068
Protein molecular weight: 38599.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00410
Location and strand information: 392438 - 394723 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional regulator YesS

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00411
Location and strand information: 394737 - 395453 (+)
Family: CE12
Protein type: CAZyme
Protein description: Rhamnogalacturonan acetylesterase RhgT
Protein isoelectric point: 5.3516
Protein molecular weight: 26650.91
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00412
Location and strand information: 395440 - 396132 (+)
Family: null
Protein type: null
Protein description: putative protein YesU

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00413
Location and strand information: 396147 - 396758 (+)
Family: 9.B.28.1.5
Protein type: TC
Protein description: putative protein YesV

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00414
Location and strand information: 396940 - 398808 (+)
Family: PL11|PL11_1|CBM2|CBM13|CBM35
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 5.8749
Protein molecular weight: 67755.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00415
Location and strand information: 398829 - 400460 (+)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4415
Protein molecular weight: 60204.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00416
Location and strand information: 400528 - 402414 (+)
Family: PL11|PL11_1|CBM2|CBM13|CBM35
Protein type: CAZyme
Protein description: Rhamnogalacturonan exolyase YesX
Protein isoelectric point: 5.1558
Protein molecular weight: 69853.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00417
Location and strand information: 402537 - 403529 (+)
Family: 8.A.5.1.3
Protein type: TC
Protein description: L-glyceraldehyde 3-phosphate reductase

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00418
Location and strand information: 403545 - 404189 (+)
Family: CE12
Protein type: CAZyme
Protein description: putative rhamnogalacturonan acetylesterase YesY
Protein isoelectric point: 7.3484
Protein molecular weight: 24308.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00419
Location and strand information: 404186 - 406183 (+)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase YesZ
Protein isoelectric point: 6.4747
Protein molecular weight: 74467.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00420
Location and strand information: 406362 - 408953 (+)
Family: PL26
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.659
Protein molecular weight: 97802.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00421
Location and strand information: 409040 - 410563 (+)
Family: 3.A.1.1.9
Protein type: TC
Protein description: Lipoprotein LipO

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00422
Location and strand information: 410605 - 411558 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00423
Location and strand information: 411577 - 412461 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000147_1|CGC6
Gene ID: MGYG000000147_00424
Location and strand information: 412498 - 413826 (-)
Family: 2.A.3.8.12
Protein type: TC
Protein description: Serine/threonine exchanger SteT

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000147_00409	GH105_e18
MGYG000000147_00411	CE12_e22
MGYG000000147_00414	PL11_e0\|CBM35_e56\|CBM2_e72\|CBM13_e93\|4.2.2.23	pectin
MGYG000000147_00415	CE12_e2
MGYG000000147_00416	PL11_e0\|CBM35_e56\|CBM2_e72\|CBM13_e93\|4.2.2.23	pectin
MGYG000000147_00418	CE12_e34
MGYG000000147_00419	GH42_e2
MGYG000000147_00420	PL26_e0

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000147_00397	Hexuronate transporter	TC	378041	379312	+	2.A.1.14.33
MGYG000000147_00398	Stage II sporulation protein SB	null	379604	379777	-	SpoIISB_antitox
MGYG000000147_00399	Stage II sporulation protein SA	TC	379777	380523	-	9.A.10.1.1
MGYG000000147_00400	hypothetical protein	TC	380633	381631	-	2.A.20.1.7
MGYG000000147_00401	hypothetical protein	null	381644	382261	-	PhoU_div
MGYG000000147_00402	Glutathione hydrolase proenzyme	null	382594	384351	+	G_glu_transpept
MGYG000000147_00403	putative protein YesV	TC	384486	385130	+	9.B.28.1.5
MGYG000000147_00404	hypothetical protein	TC	385144	386880	+	8.A.59.2.1
MGYG000000147_00405	Chemotaxis response regulator protein-glutamate methylesterase	TF	386880	388049	+	HTH_AraC
MGYG000000147_00406	Putative ABC transporter substrate-binding protein YesO	STP	388195	389490	+	SBP_bac_1
MGYG000000147_00407	Lactose transport system permease protein LacF	TC	389525	390442	+	3.A.1.1.11
MGYG000000147_00408	L-arabinose transport system permease protein AraQ	TC	390446	391339	+	3.A.1.1.11
MGYG000000147_00409	Unsaturated rhamnogalacturonyl hydrolase YesR	CAZyme	391358	392392	+	GH105
MGYG000000147_00410	HTH-type transcriptional regulator YesS	TF	392438	394723	+	HTH_AraC+HTH_AraC
MGYG000000147_00411	Rhamnogalacturonan acetylesterase RhgT	CAZyme	394737	395453	+	CE12
MGYG000000147_00412	putative protein YesU	null	395440	396132	+	DUF1961
MGYG000000147_00413	putative protein YesV	TC	396147	396758	+	9.B.28.1.5
MGYG000000147_00414	Rhamnogalacturonan endolyase YesW	CAZyme	396940	398808	+	PL11\| PL11_1\| CBM2\| CBM13\| CBM35
MGYG000000147_00415	hypothetical protein	CAZyme	398829	400460	+	CE12
MGYG000000147_00416	Rhamnogalacturonan exolyase YesX	CAZyme	400528	402414	+	PL11\| PL11_1\| CBM2\| CBM13\| CBM35
MGYG000000147_00417	L-glyceraldehyde 3-phosphate reductase	TC	402537	403529	+	8.A.5.1.3
MGYG000000147_00418	putative rhamnogalacturonan acetylesterase YesY	CAZyme	403545	404189	+	CE12
MGYG000000147_00419	Beta-galactosidase YesZ	CAZyme	404186	406183	+	GH42
MGYG000000147_00420	hypothetical protein	CAZyme	406362	408953	+	PL26
MGYG000000147_00421	Lipoprotein LipO	TC	409040	410563	+	3.A.1.1.9
MGYG000000147_00422	putative multiple-sugar transport system permease YteP	TC	410605	411558	+	3.A.1.1.10
MGYG000000147_00423	L-arabinose transport system permease protein AraQ	TC	411577	412461	+	3.A.1.1.29
MGYG000000147_00424	Serine/threonine exchanger SteT	TC	412498	413826	-	2.A.3.8.12
Protein ID	Protein Name	Type	Start	End	Strand	Signature